长沙理工大学学报(自然科学版)
极端古细菌来源糊精脱支酶的生物信息学分析与高效制备
作者:
作者单位:

(1.江南大学 食品科学与技术国家重点实验室,江苏 无锡 214122;2.江南大学 食品学院,江苏 无锡 214122;3.江南大学 江苏省食品安全与质量控制协同创新中心,江苏 无锡 214122)

作者简介:

李兆丰(1979—)(ORCID:0000?0001?7571?1083),男,教授,主要从事淀粉生物技术方面的研究。E?mail:zfli@jiangnan.edu.cn

通讯作者:

李兆丰(1979—)(ORCID:0000?0001?7571?1083),男,教授,主要从事淀粉生物技术方面的研究。E?mail:zfli@jiangnan.edu.cn

中图分类号:

Q814

基金项目:

国家重点研发计划项目(2019YFD0901901);国家自然科学基金资助项目(31901628);国家食品科学与工程一流学科建设项目(JUFSTR20180204)


Bioinformatics analysis and efficient preparation of dextrin debranching
Author:
Affiliation:

(1. State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi 214122, China;2. School of Food Science and Technology, Jiangnan University, Wuxi 214122, China;3. Jiangsu Collaborative Innovation Center of Food Safety and Quality Control, Jiangnan University, Wuxi 214122, China)

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    摘要:

    【目的】丰富淀粉脱支酶酶制剂种类,充分利用淀粉质资源,实现葡萄糖、麦芽糖、环糊精等淀粉深加工产品的高效制备,开发挖掘一种来源于极端古细菌Thermococcus gammatolerans(以下简写为T. gammatolerans)的糊精脱支酶基因。【方法】利用多种生物信息学分析工具对T. gammatolerans糊精脱支酶进行理化性质分析和结构预测;利用分子生物技术实现T. gammatolerans糊精脱支酶在大肠杆菌中的胞外分泌表达,并通过优化发酵温度、发酵时间以及诱导剂添加量来提高酶产量。【结果】T. gammatolerans糊精脱支酶是一种稳定性较高的亲水蛋白质,其氨基酸序列中不包含信号肽;将酶的DNA序列构建至含信号肽的pET?20b(+)载体中可实现T. gammatolerans糊精脱支酶在大肠杆菌BL21(DE3)中的表达和胞外分泌。T. gammatolerans糊精脱支酶的最优发酵条件为:将37 ℃温度条件下培养12 h的种子液接种到TB培养基中,在添加终浓度为0.01 mmol/L的异丙基?β?D?硫代半乳糖苷(isopropyl?β?D?thiogalactoside,IPTG)后,在25 ℃温度条件下进行84 h诱导表达。在该条件下T. gammatolerans糊精脱支酶的胞外酶活力达到了326.0 U/mL,为重组酶初始活力的1.36倍。【结论】T. gammatolerans糊精脱支酶具有优良的理化性质和较高的表达水平,在淀粉糖工业生产中具有潜在应用价值。

    Abstract:

    [Purposes] The paper aims to enrich the categories of starch debranching enzymes, make full use of starch resources, and realize the efficient preparation of starch deep?processing products such as glucose, maltose, cyclodextrin, etc., a dextrin debranching enzyme (DDE) derived from the extreme archaea (Thermococcus gammatolerans,abbreviated as T. gammatolerans) was investigated. [Methods] The physicochemical properties and structure prediction of DDE from T. gammatolerans were carried out by bioinformatics analysis tools, and then molecular biotechnology was used to achieve its extracellular secretion expression in Escherichia coli (abbreviated as E. coli). Moreover, the enzyme yield was improved by optimizing fermentation temperature, fermentation time and the amount of inducer added. [Findings] DDE from T. gammatolerans is a hydrophilic protein with high stability, and no signal peptide is included in its amino acid sequence. The enzyme DNA sequence was constructed into pET?20b(+) vector containing a signal peptide, which contributed to achieve its protein expression and extracellular secretion in E. coli BL21(DE3). The optimal fermentation conditions were as follows: the seed medium cultured at 37 ℃ for 12 h was inoculated into TB medium, and isopropyl?β?D?thiogalactoside with a final concentration of 0.01 mmol/L was added to induce expression at 25 ℃ for 84 h. Under the control of these conditions, the extracellular enzyme activity of DDE was 326.0 U/mL, which was 1.36 times higher than the initial enzyme activity. [Conclusions] DDE from T. gammatolerans has excellent physical and chemical properties as well as a high expression level, inclining that this enzyme has potential application value in the industrial sugar productions of starch.

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王璐潇,王亚梅,班宵逢,等.极端古细菌来源糊精脱支酶的生物信息学分析与高效制备[J].长沙理工大学学报(自然科学版),2022,19(4):99-107.
WANG Luxiao, WANG Yamei, BAN Xiaofeng, et al. Bioinformatics analysis and efficient preparation of dextrin debranching[J]. Journal of Changsha University of Science & Technology (Natural Science),2022,19(4):99-107.

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  • 在线发布日期: 2023-01-16
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